Data Overview:
PAVE Information      Download Library Sequences
Assembly Overview:
	Date of Assembly:    2008-08-14		Total Contigs:     100923
	Number of Libraries:    84		Multi-Clone Contigs:     53436
	Number of ESTs:    797619		Multi-Library Contigs:    37337
Search Types:
Search for UniProt ID: (eg. Q6K8B8_ORYSJ) Help Search for UniProt Description: (eg. Putative ) Help Search for EST: (eg. ZM_BFb0150D10.5) Help Search for GenBank gi: (eg. 76288719) Help Search for Contig: (eg. ZmGB_000790) Help Search via BLAST: (e.g. protein or nucleotide) Help Advanced Searches: (e.g. only L04 ESTs or annotated L04 ) Help (e.g. in L04 only ) Help Contig Search: The PAVE-assembled contigs can be filtered based any of the following criteria: Number of ESTs, GC content, ORF size, GO annotation, SlimGO namespaces, UniProt match, UniProt description, length of contig, number of mate pairs, R value and/or the expression levels of ESTs from specific libraries. Query examples given by links in the Contigs by EST library table. UniProt Search: Query the UniProt proteins that aligned to one or more PAVE contigs. Query examples given by links in the Unique and Distinct UniProt Annotation columns of the Annotation by EST library table.
Contigs by EST Library:
Zea Mays libraries (100923 contigs)
Library Title Cultivar Tissue # ESTs # Contigs* # Unique Contigs** # Singletons L04 UGA-ZmSAM-XZ2 Src: Schnable,P.S. (2005) inbred B73 Vegetative Shoot Apical Meristem (SAM) and leaf primordia staged P1-P4 30587 10896 254 1447 L05 Maize Endosperm cDNA Library Src: Arruda,P. (2005) F-352 near isogenic line endosperm 30180 8318 339 5499 L06 3530 - Full length cDNA library created by Invitrogen from multiple tissues Src: Walbot,V. (2004) B73 multiple 24475 9213 11 292 L07 ISUM5-RN Src: Schnable,P.S. (2003) B73 mixed 19987 4275 448 945 L08 946 - tassel primordium prepared by Schmidt lab Src: Walbot,V. (2002) OH43 tassels 19396 6404 222